#include <peptidelabel.h>

Inheritance diagram for pappso::masschroq::PeptideLabel:

Public Member Functions
	PeptideLabel (const pappso::PeptideSp &labelled_peptide_p, const Peptide *parent_peptide_p, const QString &label)

virtual	~PeptideLabel ()

const QString &	getLabel () const

Public Member Functions inherited from pappso::masschroq::PeptideBase
	PeptideBase (const pappso::PeptideSp &peptide_sp)

virtual	~PeptideBase ()

virtual const pappso::PeptideSp &	getPappsoPeptideSp () const
	get the peptide sequence

virtual void	computeIsotopologues (double ni_min_abundance)
	compute possible isotopes for this molecule

virtual const pappso::PeptideNaturalIsotopeList *	getPeptideNaturalIsotopeList () const
	get list of isotopes for this peptide needs computeIsotopologues before

virtual const std::vector< pappso::PeptideNaturalIsotopeAverageSp > &	getPeptideNaturalIsotopeAverageSpList (pappso::PrecisionPtr precision, std::uint8_t charge, double ni_min_abundance)
	get possible and distinguishable masses of isotopes get list of distinguishable isotopes given the charge and mass precision

Private Attributes
const Peptide *	mp_mcqlPeptide

QString	m_label

Additional Inherited Members
Protected Attributes inherited from pappso::masschroq::PeptideBase
const pappso::PeptideSp	msp_peptide

pappso::PeptideNaturalIsotopeList *	mpa_peptideNaturalIsotopeList = nullptr

std::map< std::uint8_t, std::vector< pappso::PeptideNaturalIsotopeAverageSp > >	m_peptideNaturalIsotopeAverageSpListByCharge

double	m_niMinAbundance = 0

QMutex	m_mutex

Detailed Description

Todo: write docs

Definition at line 39 of file peptidelabel.h.

Constructor & Destructor Documentation

◆ PeptideLabel()

pappso::masschroq::PeptideLabel::PeptideLabel	(	const pappso::PeptideSp &	labelled_peptide_p,
		const Peptide *	parent_peptide_p,
		const QString &	label )

Default constructor

Definition at line 33 of file peptidelabel.cpp.

  : PeptideBase(labelled_peptide_p), mp_mcqlPeptide(parent_peptide_p)
{
  m_label = label;
}

References pappso::masschroq::PeptideBase::PeptideBase(), m_label, and mp_mcqlPeptide.

◆ ~PeptideLabel()

pappso::masschroq::PeptideLabel::~PeptideLabel ( )

virtual

Destructor

Definition at line 41 of file peptidelabel.cpp.

{
  if(mpa_peptideNaturalIsotopeList != nullptr)
    delete mpa_peptideNaturalIsotopeList;
}

References pappso::masschroq::PeptideBase::mpa_peptideNaturalIsotopeList.

Member Function Documentation

◆ getLabel()

const QString & pappso::masschroq::PeptideLabel::getLabel ( ) const

Definition at line 48 of file peptidelabel.cpp.

{
  return m_label;
}

References m_label.

Referenced by pappso::masschroq::CborOutputStream::writeMeasurement().

Member Data Documentation

◆ m_label

QString pappso::masschroq::PeptideLabel::m_label

private

Definition at line 59 of file peptidelabel.h.

Referenced by PeptideLabel(), and getLabel().

◆ mp_mcqlPeptide

const Peptide* pappso::masschroq::PeptideLabel::mp_mcqlPeptide

private

Definition at line 58 of file peptidelabel.h.

Referenced by PeptideLabel().

The documentation for this class was generated from the following files:

pappsomspp/core/masschroq/peptidelabel.h
pappsomspp/core/masschroq/peptidelabel.cpp

Public Member Functions

Private Attributes

Additional Inherited Members