peptidestrparser.h

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/*******************************************************************************
 * Copyright (c) 2015 Olivier Langella <Olivier.Langella@moulon.inra.fr>.
 *
 * This file is part of the PAPPSOms++ library.
 *
 *     PAPPSOms++ is free software: you can redistribute it and/or modify
 *     it under the terms of the GNU General Public License as published by
 *     the Free Software Foundation, either version 3 of the License, or
 *     (at your option) any later version.
 *
 *     PAPPSOms++ is distributed in the hope that it will be useful,
 *     but WITHOUT ANY WARRANTY; without even the implied warranty of
 *     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 *     GNU General Public License for more details.
 *
 *     You should have received a copy of the GNU General Public License
 *     along with PAPPSOms++.  If not, see <http://www.gnu.org/licenses/>.
 *
 * Contributors:
 *     Olivier Langella <Olivier.Langella@moulon.inra.fr> - initial API and
 *implementation
 ******************************************************************************/
 
#pragma once
 
#include "peptide.h"
#include <QRegularExpression>
 
namespace pappso
{
class PMSPP_LIB_DECL PeptideStrParser
{
  public:
  static PeptideSp parseString(const QString &pepstr);
  static NoConstPeptideSp parseNoConstString(const QString &pepstr);
 
  private:
  static void parseStringToPeptide(const QString &pepstr, Peptide &peptide);
 
  private:
  static QRegularExpression _mod_parser;
  static QRegularExpression _rx_psimod;
  static QRegularExpression _rx_modmass;
 
  // static QMutex _mutex;
};
} // namespace pappso