peptide.h File Reference

#include <vector>
#include <memory>
#include <QString>
#include "../amino_acid/aa.h"
#include "peptideinterface.h"
#include <cstdint>
#include "pappsomspp/export-import-config.h"

Go to the source code of this file.

Classes
class	pappso::Peptide

Namespaces
namespace	pappso
	tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multicharge peaks to monocharge

Typedefs
typedef std::shared_ptr< Peptide >	pappso::NoConstPeptideSp

Enumerations
enum class	pappso::PeptideDirection : std::int8_t { pappso::Nter = 0 , pappso::Cter = 1 }
enum class	pappso::PeptideIonNter {   pappso::b , pappso::bstar , pappso::bo , pappso::a ,   pappso::astar , pappso::ao , pappso::bp , pappso::c }
enum class	pappso::PeptideIonCter {   pappso::y , pappso::ystar , pappso::yo , pappso::z ,   pappso::yp , pappso::x }

Functions
bool	pappso::peptideIonIsNter (Enums::PeptideIon ion_type)
	tells if an ion is Nter
bool	pappso::peptideIonTypeIsComplement (Enums::PeptideIon ion_type_ref, Enums::PeptideIon ion_type)
	tells if an ion type is the complement ion of the other
PeptideDirection	pappso::getPeptideIonDirection (Enums::PeptideIon ion_type)
	get the direction of a peptide ion