libpappsomspp
Library for mass spectrometry
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filterobopsimodsink.h
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/*******************************************************************************
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* Copyright (c) 2015 Olivier Langella <Olivier.Langella@moulon.inra.fr>.
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*
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* This file is part of the PAPPSOms++ library.
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*
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* PAPPSOms++ is free software: you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by
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* the Free Software Foundation, either version 3 of the License, or
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* (at your option) any later version.
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*
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* PAPPSOms++ is distributed in the hope that it will be useful,
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* but WITHOUT ANY WARRANTY; without even the implied warranty of
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* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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* GNU General Public License for more details.
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*
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* You should have received a copy of the GNU General Public License
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* along with PAPPSOms++. If not, see <http://www.gnu.org/licenses/>.
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*
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* Contributors:
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* Olivier Langella <Olivier.Langella@moulon.inra.fr> - initial API and
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*implementation
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******************************************************************************/
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#pragma once
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#include <list>
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#include "
obopsimod.h
"
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namespace
pappso
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{
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class
PMSPP_LIB_DECL
FilterOboPsiModSink
:
public
OboPsiModHandlerInterface
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{
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public
:
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FilterOboPsiModSink
();
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virtual
~FilterOboPsiModSink
();
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void
setOboPsiModTerm
(
const
OboPsiModTerm
&term)
override
;
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const
OboPsiModTerm
&
getOne
();
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const
OboPsiModTerm
&
getFirst
();
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std::size_t
size
();
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const
std::list<OboPsiModTerm> &
getOboPsiModTermList
();
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private
:
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std::list<OboPsiModTerm>
m_oboPsiModTermList
;
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};
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}
// namespace pappso
pappso::FilterOboPsiModSink::getOboPsiModTermList
const std::list< OboPsiModTerm > & getOboPsiModTermList()
Definition
filterobopsimodsink.cpp:38
pappso::FilterOboPsiModSink::m_oboPsiModTermList
std::list< OboPsiModTerm > m_oboPsiModTermList
Definition
filterobopsimodsink.h:52
pappso::FilterOboPsiModSink::size
std::size_t size()
Definition
filterobopsimodsink.cpp:83
pappso::FilterOboPsiModSink::setOboPsiModTerm
void setOboPsiModTerm(const OboPsiModTerm &term) override
triggered function on each obo term when parsing obo file
Definition
filterobopsimodsink.cpp:44
pappso::FilterOboPsiModSink::getFirst
const OboPsiModTerm & getFirst()
Definition
filterobopsimodsink.cpp:68
pappso::FilterOboPsiModSink::FilterOboPsiModSink
FilterOboPsiModSink()
Definition
filterobopsimodsink.cpp:29
pappso::FilterOboPsiModSink::getOne
const OboPsiModTerm & getOne()
Definition
filterobopsimodsink.cpp:50
pappso::OboPsiModHandlerInterface
Definition
obopsimodhandlerinterface.h:31
pappso::OboPsiModTerm
Definition
obopsimodterm.h:34
PMSPP_LIB_DECL
#define PMSPP_LIB_DECL
Definition
export-import-config.h:14
pappso
tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multichar...
Definition
aa.cpp:39
obopsimod.h
pappsomspp
core
obo
filterobopsimodsink.h
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