pappso::PrecisionBase Class Reference

#include <precision.h>

Inheritance diagram for pappso::PrecisionBase:

Public Member Functions
virtual Enums::PrecisionUnit	unit () const =0
virtual pappso_double	getNominal () const final
virtual pappso_double	delta (pappso_double value) const =0
virtual QString	toString () const =0

Protected Member Functions
	PrecisionBase (pappso_double nominal)

Protected Attributes
const pappso_double	m_nominal

Detailed Description

Definition at line 43 of file precision.h.

Constructor & Destructor Documentation

PrecisionBase()

pappso::PrecisionBase::PrecisionBase ( pappso_double nominal )

inlineprotected

Definition at line 48 of file precision.h.

                                       : m_nominal(nominal)
  {
  }

References m_nominal.

Referenced by pappso::DaltonPrecision::DaltonPrecision(), pappso::PpmPrecision::PpmPrecision(), and pappso::ResPrecision::ResPrecision().

Member Function Documentation

delta()

virtual pappso_double pappso::PrecisionBase::delta ( pappso_double value ) const

pure virtual

Implemented in pappso::DaltonPrecision, pappso::PpmPrecision, and pappso::ResPrecision.

References delta().

Referenced by pappso::AaStringCodeMassMatching::AaStringCodeMassMatching(), pappso::MzRange::MzRange(), pappso::Trace::containsX(), delta(), pappso::AaCode::getAaCodeByMass(), pappso::MsRunDataSetTreeNode::precursorIonNodesByPrecursorMz(), and pappso::MsRunDataSetTreeNode::productNodesByPrecursorMz().

getNominal()

pappso_double pappso::PrecisionBase::getNominal ( ) const

finalvirtual

Definition at line 72 of file precision.cpp.

{
  return m_nominal;
}

References m_nominal.

Referenced by pappso::specglob::PeptideModel::checkForAaModification(), pappso::specglob::PeptideModel::checkForAaModificationP(), pappso::specglob::PeptideModel::checkForMutation(), pappso::specglob::PeptideModel::checkForMutations(), pappso::specglob::PeptideModel::eliminateComplementaryDelta(), pappso::specglob::PeptideModel::eliminateNegativeOffset(), pappso::specself::SelfSpectrumDataPoint::fillAntiSpectrumDataPoint(), pappso::PrecisionFactory::getPrecisionPtrFractionInstance(), pappso::PrecisionWidget::setPrecision(), and unit().

toString()

virtual QString pappso::PrecisionBase::toString ( ) const

pure virtual

Implemented in pappso::DaltonPrecision, pappso::PpmPrecision, and pappso::ResPrecision.

References toString().

Referenced by pappso::XtandemPresetReader::getMs2FiltersOptions(), pappso::MassSpectrumWidget::setMs1Precision(), pappso::MassSpectrumWidget::setMs2Precision(), and toString().

unit()

virtual Enums::PrecisionUnit pappso::PrecisionBase::unit ( ) const

pure virtual

Implemented in pappso::DaltonPrecision, pappso::PpmPrecision, and pappso::ResPrecision.

References getNominal().

Referenced by pappso::PrecisionFactory::getPrecisionPtrFractionInstance(), and pappso::PrecisionWidget::setPrecision().

Member Data Documentation

m_nominal

const pappso_double pappso::PrecisionBase::m_nominal

protected

Definition at line 46 of file precision.h.

Referenced by PrecisionBase(), pappso::DaltonPrecision::delta(), pappso::PpmPrecision::delta(), pappso::ResPrecision::delta(), getNominal(), pappso::DaltonPrecision::toString(), pappso::PpmPrecision::toString(), and pappso::ResPrecision::toString().

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The documentation for this class was generated from the following files:

• pappsomspp/core/precision.h
• pappsomspp/core/precision.cpp