pappso::Ion Class Reference

#include <ion.h>

Inheritance diagram for pappso::Ion:

Public Member Functions
	Ion ()
	~Ion ()
virtual pappso_double	getMass () const =0
virtual pappso_double	getMz (unsigned int charge) const final

Detailed Description

Definition at line 39 of file ion.h.

Constructor & Destructor Documentation

Ion()

pappso::Ion::Ion

(

)

Definition at line 36 of file ion.cpp.

{
}

~Ion()

pappso::Ion::~Ion

(

)

Definition at line 40 of file ion.cpp.

{
}

Member Function Documentation

getMass()

virtual pappso_double pappso::Ion::getMass ( ) const

pure virtual

Implemented in pappso::Peptide, pappso::PeptideFragment, pappso::PeptideFragmentIon, and pappso::PeptideNaturalIsotope.

References getMz().

Referenced by getMz(), and pappso::PeptideInterface::matchPeak().

getMz()

pappso_double pappso::Ion::getMz ( unsigned int charge ) const

finalvirtual

Definition at line 45 of file ion.cpp.

{
  if(charge == 0)
    {
      throw PappsoException("charge == 0");
    }
  return ((getMass() + (MHPLUS * charge)) / charge);
}

References getMass(), and pappso::MHPLUS().

Referenced by getMass(), and pappso::PsmFeatures::setPeptideSpectrumCharge().

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The documentation for this class was generated from the following files:

• pappsomspp/core/peptide/ion.h
• pappsomspp/core/peptide/ion.cpp