pappso::cbor::psm::PsmFileReaderBase Member List

This is the complete list of members for pappso::cbor::psm::PsmFileReaderBase, including all inherited members.

CborStreamReaderInterface()	pappso::cbor::CborStreamReaderInterface
close()	pappso::cbor::psm::PsmFileReaderBase	virtual
currentProteinRefListContainsDecoy() const	pappso::cbor::psm::PsmFileReaderBase	protected
currentProteinRefListContainsTarget() const	pappso::cbor::psm::PsmFileReaderBase	protected
fastaFilesReady(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
getCurrentPsmPeptideSp() const	pappso::cbor::psm::PsmFileReaderBase	protected
getCurrentQualifiedMassSpectrumSPtr() const	pappso::cbor::psm::PsmFileReaderBase	protected
getExpectedString()	pappso::cbor::CborStreamReaderInterface	protected
getPrecursorMass(double mz_prec, uint charge) const	pappso::cbor::psm::PsmFileReaderBase	protected
informationsReady(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
initCborReader(QFile *pcborfile)	pappso::cbor::CborStreamReaderInterface	protected
logReady(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
m_cborInformations	pappso::cbor::psm::PsmFileReaderBase	protected
m_cborLog	pappso::cbor::psm::PsmFileReaderBase	protected
m_cborParameterMap	pappso::cbor::psm::PsmFileReaderBase	protected
m_cborScanId	pappso::cbor::psm::PsmFileReaderBase	protected
m_cborScanMs2	pappso::cbor::psm::PsmFileReaderBase	protected
m_cborScanPrecursor	pappso::cbor::psm::PsmFileReaderBase	protected
m_cborScanPsmEval	pappso::cbor::psm::PsmFileReaderBase	protected
m_currentIdentificationFileList	pappso::cbor::psm::PsmFileReaderBase	protected
m_currentPeaklistFile	pappso::cbor::psm::PsmFileReaderBase	protected
m_currentPsmProforma	pappso::cbor::psm::PsmFileReaderBase	protected
m_currentPsmProteinRefList	pappso::cbor::psm::PsmFileReaderBase	protected
m_currentSampleName	pappso::cbor::psm::PsmFileReaderBase	protected
m_data	pappso::cbor::CborStreamReaderInterface	protected
m_decoyFastaFiles	pappso::cbor::psm::PsmFileReaderBase	protected
m_expectedString	pappso::cbor::CborStreamReaderInterface	protected
m_proteinMap	pappso::cbor::psm::PsmFileReaderBase	protected
m_targetFastaFiles	pappso::cbor::psm::PsmFileReaderBase	protected
mpa_cborReader	pappso::cbor::CborStreamReaderInterface	protected
parameterMapReady(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
proteinMapReady(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
PsmFileReaderBase()	pappso::cbor::psm::PsmFileReaderBase
psmReady(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
readCbor(QFile *cborp, pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase
readInformations(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
readLog(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
readParameterMap(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
readProteinMap(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
readPsm(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
readPsmFile(bool &is_ok)	pappso::cbor::psm::PsmFileReaderBase	protected
readPsmProteinRef(bool &is_ok)	pappso::cbor::psm::PsmFileReaderBase	protected
readRoot(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protected
readSample(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
readScan(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
sampleFinished(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
sampleListFinished(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
sampleListStarted(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
sampleStarted(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
scanFinished(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
scanStarted(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
writePsmFile(CborStreamWriter &writer, const PsmFile &psm_file)	pappso::cbor::psm::PsmFileReaderBase	protected
writePsmFileList(CborStreamWriter &writer, const std::vector< PsmFile > &file_list)	pappso::cbor::psm::PsmFileReaderBase	protected
~CborStreamReaderInterface()	pappso::cbor::CborStreamReaderInterface	virtual
~PsmFileReaderBase()	pappso::cbor::psm::PsmFileReaderBase	virtual