pappso::cbor::psm::PsmCbor2Json Member List

This is the complete list of members for pappso::cbor::psm::PsmCbor2Json, including all inherited members.

CborStreamReaderInterface()	pappso::cbor::CborStreamReaderInterface
close() override	pappso::cbor::psm::PsmCbor2Json	virtual
currentProteinRefListContainsDecoy() const	pappso::cbor::psm::PsmFileReaderBase	protected
currentProteinRefListContainsTarget() const	pappso::cbor::psm::PsmFileReaderBase	protected
fastaFilesReady(pappso::UiMonitorInterface &monitor) override	pappso::cbor::psm::PsmCbor2Json	protectedvirtual
getCurrentPsmPeptideSp() const	pappso::cbor::psm::PsmFileReaderBase	protected
getCurrentQualifiedMassSpectrumSPtr() const	pappso::cbor::psm::PsmFileReaderBase	protected
getExpectedString()	pappso::cbor::CborStreamReaderInterface	protected
getPrecursorMass(double mz_prec, uint charge) const	pappso::cbor::psm::PsmFileReaderBase	protected
informationsReady(pappso::UiMonitorInterface &monitor) override	pappso::cbor::psm::PsmCbor2Json	protectedvirtual
initCborReader(QFile *pcborfile)	pappso::cbor::CborStreamReaderInterface	protected
logReady(pappso::UiMonitorInterface &monitor) override	pappso::cbor::psm::PsmCbor2Json	protectedvirtual
m_cborInformations	pappso::cbor::psm::PsmFileReaderBase	protected
m_cborLog	pappso::cbor::psm::PsmFileReaderBase	protected
m_cborParameterMap	pappso::cbor::psm::PsmFileReaderBase	protected
m_cborScanId	pappso::cbor::psm::PsmFileReaderBase	protected
m_cborScanMs2	pappso::cbor::psm::PsmFileReaderBase	protected
m_cborScanPrecursor	pappso::cbor::psm::PsmFileReaderBase	protected
m_cborScanPsmEval	pappso::cbor::psm::PsmFileReaderBase	protected
m_currentIdentificationFileList	pappso::cbor::psm::PsmFileReaderBase	protected
m_currentPeaklistFile	pappso::cbor::psm::PsmFileReaderBase	protected
m_currentPsmProforma	pappso::cbor::psm::PsmFileReaderBase	protected
m_currentPsmProteinRefList	pappso::cbor::psm::PsmFileReaderBase	protected
m_currentSampleName	pappso::cbor::psm::PsmFileReaderBase	protected
m_data	pappso::cbor::CborStreamReaderInterface	protected
m_decoyFastaFiles	pappso::cbor::psm::PsmFileReaderBase	protected
m_expectedString	pappso::cbor::CborStreamReaderInterface	protected
m_proteinMap	pappso::cbor::psm::PsmFileReaderBase	protected
m_targetFastaFiles	pappso::cbor::psm::PsmFileReaderBase	protected
mp_jsonOutput	pappso::cbor::psm::PsmCbor2Json	protected
mpa_cborReader	pappso::cbor::CborStreamReaderInterface	protected
parameterMapReady(pappso::UiMonitorInterface &monitor) override	pappso::cbor::psm::PsmCbor2Json	protectedvirtual
proteinMapReady(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
PsmCbor2Json(pappso::cbor::JsonStreamWriter *json_output_p)	pappso::cbor::psm::PsmCbor2Json
PsmFileReaderBase()	pappso::cbor::psm::PsmFileReaderBase
psmReady(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
readCbor(QFile *cborp, pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase
readInformations(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
readLog(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
readParameterMap(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
readProteinMap(pappso::UiMonitorInterface &monitor) override	pappso::cbor::psm::PsmCbor2Json	protectedvirtual
readPsm(pappso::UiMonitorInterface &monitor) override	pappso::cbor::psm::PsmCbor2Json	protectedvirtual
readPsmFile(bool &is_ok)	pappso::cbor::psm::PsmFileReaderBase	protected
readPsmProteinRef(bool &is_ok)	pappso::cbor::psm::PsmFileReaderBase	protected
readRoot(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protected
readSample(pappso::UiMonitorInterface &monitor) override	pappso::cbor::psm::PsmCbor2Json	protectedvirtual
readScan(pappso::UiMonitorInterface &monitor) override	pappso::cbor::psm::PsmCbor2Json	protectedvirtual
sampleFinished(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
sampleListFinished(pappso::UiMonitorInterface &monitor) override	pappso::cbor::psm::PsmCbor2Json	protectedvirtual
sampleListStarted(pappso::UiMonitorInterface &monitor) override	pappso::cbor::psm::PsmCbor2Json	protectedvirtual
sampleStarted(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
scanFinished(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
scanStarted(pappso::UiMonitorInterface &monitor)	pappso::cbor::psm::PsmFileReaderBase	protectedvirtual
writePsmFile(CborStreamWriter &writer, const PsmFile &psm_file)	pappso::cbor::psm::PsmFileReaderBase	protected
writePsmFileList(CborStreamWriter &writer, const std::vector< PsmFile > &file_list)	pappso::cbor::psm::PsmFileReaderBase	protected
~CborStreamReaderInterface()	pappso::cbor::CborStreamReaderInterface	virtual
~PsmCbor2Json()	pappso::cbor::psm::PsmCbor2Json	virtual
~PsmFileReaderBase()	pappso::cbor::psm::PsmFileReaderBase	virtual