| addFixedCterModificationString(const QString &mod_str) | pappso::PeptideModificatorPipeline | |
| addFixedModificationString(const QString &mod_str) | pappso::PeptideModificatorPipeline | |
| addFixedNterModificationString(const QString &mod_str) | pappso::PeptideModificatorPipeline | |
| addLabeledModificationString(const QString &mod_str) | pappso::PeptideModificatorPipeline | |
| addPotentialCterModificationString(const QString &mod_str) | pappso::PeptideModificatorPipeline | |
| addPotentialModificationString(const QString &mod_str) | pappso::PeptideModificatorPipeline | |
| addPotentialNterModificationString(const QString &mod_str) | pappso::PeptideModificatorPipeline | |
| m_pepModificatorPtrList | pappso::PeptideModificatorPipeline | private |
| m_sink | pappso::PeptideModificatorPipeline | private |
| mp_firstModificator | pappso::PeptideModificatorPipeline | private |
| mp_lastPeptideSinkInterface | pappso::PeptideModificatorPipeline | private |
| mp_peptideModificatorTee | pappso::PeptideModificatorPipeline | private |
| parseFixedModification(const QString &mod_str, bool Nter, bool Cter, bool else_prot) | pappso::PeptideModificatorPipeline | private |
| parseLabeledModification(const QString &mod_str, bool Nter, bool Cter, bool else_prot) | pappso::PeptideModificatorPipeline | private |
| parsePotentialModification(const QString &mod_str, bool Nter, bool Cter, bool else_prot) | pappso::PeptideModificatorPipeline | private |
| PeptideModificatorPipeline() | pappso::PeptideModificatorPipeline | |
| PeptideModificatorPipeline(const PeptideModificatorPipeline &other) | pappso::PeptideModificatorPipeline | |
| privAddFixedModificationString(const QString &mod_str, bool Nter, bool Cter, bool else_prot) | pappso::PeptideModificatorPipeline | private |
| privAddPotentialModificationString(const QString &mod_str, bool Nter, bool Cter, bool else_prot) | pappso::PeptideModificatorPipeline | private |
| setPeptide(std::int8_t sequence_database_id, const ProteinSp &protein_sp, bool is_decoy, const QString &peptide_str, unsigned int start, bool is_nter, unsigned int missed_cleavage_number, bool semi_enzyme) override | pappso::PeptideModificatorPipeline | virtual |
| setPeptideSp(std::int8_t sequence_database_id, const ProteinSp &protein_sp, bool is_decoy, const PeptideSp &peptide_sp_original, unsigned int start, bool is_nter, unsigned int missed_cleavage_number, bool semi_enzyme) override | pappso::PeptideModificatorPipeline | virtual |
| setSink(PeptideModificatorInterface *sink) override | pappso::PeptideModificatorPipeline | virtual |
| ~PeptideModificatorInterface() | pappso::PeptideModificatorInterface | inlinevirtual |
| ~PeptideModificatorPipeline() | pappso::PeptideModificatorPipeline | virtual |