| accept(MsRunDataSetTreeNodeVisitorInterface &visitor) | pappso::MsRunDataSetTree | |
| accept(MsRunDataSetTreeNodeVisitorInterface &visitor, std::vector< pappso::MsRunDataSetTreeNode * >::const_iterator nodes_begin_iterator, std::vector< pappso::MsRunDataSetTreeNode * >::const_iterator nodes_end_iterator) | pappso::MsRunDataSetTree | |
| addDataSetQualMassSpectraInsideDtOrRtRange(double start, double end, QualMassSpectraVector &mass_spectra, Enums::DataKind data_kind) const | pappso::MsRunDataSetTree | |
| addDataSetTreeNodesInsideDtOrRtRange(double start, double end, NodeVector &nodes, Enums::DataKind data_kind) const | pappso::MsRunDataSetTree | |
| addMassSpectrum(QualifiedMassSpectrumCstSPtr mass_spectrum) | pappso::MsRunDataSetTree | |
| addMassSpectrum(QualifiedMassSpectrumCstSPtr mass_spectrum, MsRunDataSetTreeNode *parent) | pappso::MsRunDataSetTree | private |
| addMassSpectrum(QualifiedMassSpectrumCstSPtr mass_spectrum, std::size_t precursor_spectrum_index) | pappso::MsRunDataSetTree | private |
| depth() const | pappso::MsRunDataSetTree | |
| documentNodeInDtRtMap(double time, MsRunDataSetTreeNode *node_p, Enums::DataKind data_kind) | pappso::MsRunDataSetTree | private |
| DoubleNodeVectorMap typedef | pappso::MsRunDataSetTree | |
| findNode(QualifiedMassSpectrumCstSPtr mass_spectrum_csp) const | pappso::MsRunDataSetTree | |
| findNode(std::size_t spectrum_index) const | pappso::MsRunDataSetTree | |
| flattenedView() | pappso::MsRunDataSetTree | |
| flattenedViewMsLevel(std::size_t ms_level, bool with_descendants=false) | pappso::MsRunDataSetTree | |
| getIndexNodeMap() const | pappso::MsRunDataSetTree | |
| getRootNodes() const | pappso::MsRunDataSetTree | |
| getSpectrumCount() const | pappso::MsRunDataSetTree | |
| indexNodeMapSize() const | pappso::MsRunDataSetTree | |
| m_dtDoubleNodeVectorMap | pappso::MsRunDataSetTree | private |
| m_indexNodeMap | pappso::MsRunDataSetTree | private |
| m_rootNodes | pappso::MsRunDataSetTree | private |
| m_rtDoubleNodeVectorMap | pappso::MsRunDataSetTree | private |
| m_spectrumCount | pappso::MsRunDataSetTree | private |
| massSpectrumIndex(const MsRunDataSetTreeNode *node) const | pappso::MsRunDataSetTree | |
| massSpectrumIndex(QualifiedMassSpectrumCstSPtr qualified_mass_spectrum_csp) const | pappso::MsRunDataSetTree | |
| mcsp_msRunId | pappso::MsRunDataSetTree | private |
| MsRunDataSetTree(MsRunIdCstSPtr ms_run_id_csp) | pappso::MsRunDataSetTree | |
| NodeVector typedef | pappso::MsRunDataSetTree | |
| precursorNodeByProductSpectrumIndex(std::size_t product_spectrum_index) | pappso::MsRunDataSetTree | |
| precursorNodesByPrecursorMz(pappso_double mz, PrecisionPtr precision_ptr) | pappso::MsRunDataSetTree | |
| productNodesByPrecursorSpectrumIndex(std::size_t precursor_spectrum_index) | pappso::MsRunDataSetTree | |
| QualMassSpectraVector typedef | pappso::MsRunDataSetTree | |
| removeDataSetQualMassSpectraOutsideDtOrRtRange(double start, double end, QualMassSpectraVector &mass_spectra, Enums::DataKind data_kind) const | pappso::MsRunDataSetTree | |
| removeDataSetTreeNodesOutsideDtOrRtRange(double start, double end, NodeVector &nodes, Enums::DataKind data_kind) const | pappso::MsRunDataSetTree | |
| size() const | pappso::MsRunDataSetTree | |
| ~MsRunDataSetTree() | pappso::MsRunDataSetTree | virtual |